CREMI

Results for the neuron segmentation category, averaged over all samples.

Group	Submission	CREMI score	VOI split	VOI merge	ARAND
afish1001	wunet_wj	2.212	0.641	5.157	0.854
afish1001	wunet_ce	2.244	0.829	4.982	0.882
afish1001	unet_wj	2.223	0.648	5.178	0.858
afish1001	unet_ce	2.246	0.831	4.987	0.883
DIVE	unet4	0.987	1.523	0.775	0.429
VIDAR	unet3d	0.534	0.833	0.282	0.256
DIVE	unet3	0.994	1.451	0.831	0.441
DIVE	unet2	0.972	1.481	0.803	0.419
DIVE	unet1	1.001	1.436	0.861	0.443
DIVE	unet-4	0.987	1.523	0.775	0.429
DIVE	unet-3	0.994	1.451	0.831	0.441
DIVE	unet-2	0.972	1.481	0.803	0.419
DIVE	unet-1	1.001	1.436	0.861	0.443
-	testsubm	2.683	3.083	4.768	0.918
VCG	testmala	2.412	3.297	3.283	0.888
IAL	spUNetMC	0.317	0.519	0.125	0.156
IAL	spUNetHC	0.540	0.755	0.325	0.271
IAL	spUNet1	0.504	0.873	0.091	0.266
PCH	sff_aug	0.277	0.471	0.118	0.130
PCH	sff_a	0.277	0.473	0.119	0.131
DIVE	segBW5	0.775	1.112	0.651	0.345
DIVE	segBW4	0.772	1.113	0.645	0.344
DIVE	segBW3	0.776	1.110	0.653	0.346
DIVE	segBW2	0.776	1.111	0.651	0.346
DIVE	segBW1	0.693	1.296	0.314	0.304

CREMI score: The geometric mean of (VOI split + VOI merge) and ARAND.
VOI split and merge: The Variation of Information between a segmentation X and ground truth Y. The split and merge parts correspond to the conditional entropies H(X|Y) and H(Y|X), respectively.
ARAND: The Adapted Rand Error, i.e., 1.0 - Rand F-Score.

For each value, lower is better.

Results for the synaptic cleft detection category, averaged over all samples.

Group	Submission	CREMI score	FP	FN	1 - F-score	ADGT	ADF
VCG	FgDT08	795.59	727.0	616222.3	0.834	60.07	1531.10
3DEM	BesA275	252.56	254701.0	581781.3	0.456	199.02	306.10
VCG	FgDTSm08	434.91	4747.0	355265.0	0.619	42.86	826.96
VCG	FgDTSm05	232.99	15377.7	173608.0	0.349	56.70	409.27
cxj	USTC	284.98	1015564.7	108523.3	0.600	516.31	53.65
SDG	Unet0	171.88	33308.3	108288.7	0.262	91.45	252.31
3DEM	ABC_C	375.91	289364.7	89797.7	0.619	385.49	366.34
VCG	FgDT05	124.93	15650.7	88933.3	0.165	41.04	208.83
IAL	3d_model	229.78	86415.3	84295.0	0.317	255.27	204.29
DIVE	cleftloh	194.25	22502.0	67513.7	0.236	102.22	286.27
Kreshuk	MG	152.52	129494.3	63958.0	0.278	157.83	147.21
IAL	full_mod	137.73	153335.3	61967.7	0.310	176.37	99.09
IAL	unaries	150.64	175624.3	60151.3	0.327	213.52	87.77
IAL	A+test	153.91	196558.0	55962.3	0.339	232.28	75.53
DIVE	cleft_hi	107.24	44844.3	52063.7	0.158	94.14	120.33
DIVE	CRNNGate	120.36	62609.0	47395.7	0.175	110.06	130.66
CMM	Max Test	74.10	24019.3	44179.7	0.101	64.63	83.56
DLST	DLST003	91.71	33118.7	35934.7	0.125	58.14	125.27
DIVE	clefitlo	151.12	105664.7	32928.0	0.220	190.20	112.05
HSS	3DUNet04	79.33	29732.0	27514.3	0.113	53.22	105.44
HSS	HSZ	90.11	65092.3	25807.3	0.154	99.61	80.61
DIVE	WeitUNet	78.12	54372.7	24480.3	0.128	71.51	84.73
DIVE	CRunet22	180.77	162763.0	23055.7	0.312	305.59	55.95
HSS	3DUNet	65.34	43440.3	22443.3	0.106	63.26	67.43
DIVE	BouUNet	81.45	75985.0	21974.0	0.160	76.66	86.24

CREMI score: The mean of ADGT and ADF. We are not including the F-Score for now, as our current way of computing it can lead to unfair comparison. We are working on a more robust measure and will update the results accordingly.
FP, FN, and F-Score: The False Positives, False Negatives, and the resulting F-Score in the clefts detection volume. See metrics for details.
ADGT: The average distance of any found cleft voxel to the closest ground truth cleft voxel.
ADF: The average distance of any ground truth cleft voxel to the closest found cleft voxel.

For each value, lower is better (F-Score shown as 1 - F-Score).

Results for the synaptic partner identification category, averaged over all samples.

Group	Submission	CREMI score	FP	FN
PNI	asyn_mod	0.423	367.667	262.333
NO2	lr_balan	0.447	175.333	314.000
HCBS	Tr66_80K	0.449	223.000	286.667
HCBS	Tr66comb	0.451	219.000	292.333
DIVE	PTR_V2	0.453	162.667	333.667
IAL	PSP_unar	0.461	266.667	281.000
IAL	PSP_full	0.464	187.333	310.000
HCBS	PrnTrn66	0.465	178.667	322.333
PNI	asyn_at0	0.468	293.333	297.000
HCBS	Tr66t-01	0.469	182.667	318.667
PNI	asyn_at1	0.490	274.333	314.667
PNI	asyn_ori	0.493	310.000	302.333
NO2	lr_affin	0.567	118.333	450.000
AnonumoysGroup	PrTrn66	0.620	238.000	451.667

CREMI score: 1 - F-Score of the FP and FN.
FP, FN: The False Positives and False Negatives synaptic partner pairs. See metrics for details.

For each value, lower is better.

MICCAI Challenge on Circuit Reconstruction from Electron Microscopy Images