CREMI

Results for the neuron segmentation category, averaged over all samples.

Group	Submission	CREMI score	VOI split	VOI merge	ARAND
PNI	RS-UNet2	0.246	0.318	0.158	0.127
PNI	PNIUNet2	0.242	0.326	0.127	0.130
PNI	PNIUNet3	0.240	0.327	0.124	0.128
JRC	LSDLR	0.344	0.336	0.256	0.203
IAL	CMaskSP2	0.327	0.339	0.205	0.201
IAL	UnetLMC2	0.221	0.339	0.115	0.108
IAL	CMaskMC	0.305	0.341	0.175	0.184
PNI	PNIUNet1	0.251	0.344	0.129	0.134
PNI	PNIUNet5	0.228	0.345	0.106	0.116
PNI	PNIUNet7	0.228	0.345	0.106	0.116
IAL	CMaskMC2	0.276	0.348	0.152	0.157
IAL	CMaskSP3	0.378	0.349	0.323	0.220
PNI	PNIUNet6	0.237	0.349	0.114	0.122
PNI	PNIUNet8	0.237	0.349	0.114	0.122
PNI	PNIUNet0	0.229	0.350	0.101	0.117
IAL	UnetLRIF	0.242	0.350	0.135	0.121
PNI	PNIUNet4	0.237	0.350	0.110	0.122
IAL	CMaskSP1	0.317	0.360	0.186	0.187
IAL	CMaskMWS	0.314	0.361	0.162	0.196
IAL	HCCAvgPx	0.224	0.361	0.085	0.113
IAL	MutexWS3	0.362	0.362	0.312	0.199
IAL	HCAvgPx	0.224	0.364	0.083	0.114
IAL	MutexWS4	0.342	0.364	0.288	0.182
IAL	GASP_avg	0.241	0.365	0.096	0.129
IAL	CMaskSP4	0.280	0.371	0.159	0.149

CREMI score: The geometric mean of (VOI split + VOI merge) and ARAND.
VOI split and merge: The Variation of Information between a segmentation X and ground truth Y. The split and merge parts correspond to the conditional entropies H(X|Y) and H(Y|X), respectively.
ARAND: The Adapted Rand Error, i.e., 1.0 - Rand F-Score.

For each value, lower is better.

Results for the synaptic cleft detection category, averaged over all samples.

Group	Submission	CREMI score	FP	FN	1 - F-score	ADGT	ADF
DIVE	Rclefts	380.86	167900713.3	0.0	0.990	761.72	0.00
DIVE	OrClefts	380.86	167900713.3	0.0	0.990	761.72	0.00
DIVE	ResUnet	380.86	167900713.3	0.0	0.990	761.72	0.00
CMM	GenT	380.86	167900713.3	0.0	0.990	761.72	0.00
VCG	FgRj0805	117.25	1329995.3	327.7	0.610	232.66	1.84
VCG	FgRj0808	117.25	1329995.3	327.7	0.610	232.66	1.84
DIVE	Exp12_64	202.46	335698.7	0.0	0.374	402.99	1.93
DIVE	cleft_A+	199.35	378215.7	0.0	0.386	395.99	2.72
DIVE	3class8t	198.78	262876.7	0.0	0.282	393.81	3.76
DIVE	exp18_la	284.83	684532.0	0.0	0.493	564.72	4.94
lbdl	lb_lst	64.22	118160.0	0.0	0.209	121.50	6.93
VCG	FgSemi05	57.63	221731.7	975.7	0.232	107.73	7.52
lbdl	lb_thicc	59.04	107211.3	234.0	0.190	109.17	8.91
DIVE	cleft_lb	139.19	284326.0	0.0	0.349	265.87	12.52
VCG	FgSemi08	55.41	160792.7	3178.3	0.181	96.54	14.28
lbdl	Cleft_lb	97.85	227868.0	0.0	0.262	181.08	14.61
DIVE	ex19t2	283.68	173078.7	0.0	0.201	551.77	15.60
DIVE	SegClef1	156.70	617804.0	3339.3	0.373	296.85	16.56
3DEM	All_A	76.12	157692.7	6808.7	0.256	130.59	21.66
VCG	FgSm0805	54.23	111486.0	4917.0	0.142	84.04	24.43
DIVE	cleftlol	179.28	723352.7	2716.7	0.375	334.05	24.51
VCG	FgUPlus	57.90	137412.7	4763.3	0.160	90.99	24.81
JRC	DTU-2	67.56	70761.3	10069.3	0.123	109.67	25.46
DIVE	exp18_be	136.63	8797.3	0.0	0.014	247.19	26.08
DIVE	CRunet2	318.85	107459361.0	4195.7	0.824	611.30	26.40

CREMI score: The mean of ADGT and ADF. We are not including the F-Score for now, as our current way of computing it can lead to unfair comparison. We are working on a more robust measure and will update the results accordingly.
FP, FN, and F-Score: The False Positives, False Negatives, and the resulting F-Score in the clefts detection volume. See metrics for details.
ADGT: The average distance of any found cleft voxel to the closest ground truth cleft voxel.
ADF: The average distance of any ground truth cleft voxel to the closest found cleft voxel.

For each value, lower is better (F-Score shown as 1 - F-Score).

Results for the synaptic partner identification category, averaged over all samples.

Group	Submission	CREMI score	FP	FN
AnonumoysGroup	PrTrn66	0.620	238.000	451.667
NO2	lr_affin	0.567	118.333	450.000
DIVE	PTR_V2	0.453	162.667	333.667
HCBS	PrnTrn66	0.465	178.667	322.333
HCBS	Tr66t-01	0.469	182.667	318.667
PNI	asyn_at1	0.490	274.333	314.667
NO2	lr_balan	0.447	175.333	314.000
IAL	PSP_full	0.464	187.333	310.000
PNI	asyn_ori	0.493	310.000	302.333
PNI	asyn_at0	0.468	293.333	297.000
HCBS	Tr66comb	0.451	219.000	292.333
HCBS	Tr66_80K	0.449	223.000	286.667
IAL	PSP_unar	0.461	266.667	281.000
PNI	asyn_mod	0.423	367.667	262.333

CREMI score: 1 - F-Score of the FP and FN.
FP, FN: The False Positives and False Negatives synaptic partner pairs. See metrics for details.

For each value, lower is better.

MICCAI Challenge on Circuit Reconstruction from Electron Microscopy Images