CREMI

Results for the neuron segmentation category, averaged over all samples.

Group	Submission	CREMI score	VOI split	VOI merge	ARAND
DIVE	BasUnet	2.959	1.740	7.366	0.962
Cvlab	cvlab	3.472	6.069	6.542	0.956
IIL+DIVE@TAMU	new_segm	2.671	0.928	6.475	0.964
Cvlab	cvlab_2	2.756	1.526	6.411	0.957
-	Final	2.896	3.805	5.599	0.895
Cvlab	cvlab_1	2.891	4.686	5.421	0.828
afish1001	unet_wj	2.223	0.648	5.178	0.858
afish1001	wunet_wj	2.212	0.641	5.157	0.854
afish1001	ABWUnet	2.199	0.696	5.042	0.856
afish1001	OurUnet	2.197	0.698	5.034	0.855
afish1001	unet_ce	2.246	0.831	4.987	0.883
afish1001	wunet_ce	2.244	0.829	4.982	0.882
-	testsubm	2.683	3.083	4.768	0.918
VCG	ZWZ-0.0	2.675	3.524	4.193	0.927
HVCL	Deep Res	2.212	1.672	4.182	0.837
VCG	testmala	2.412	3.297	3.283	0.888
DIVE	RUseg	2.976	6.003	3.121	0.972
SeungLab-eding	Seung-ed	1.525	0.895	2.160	0.764
DIVE	focalZ	1.424	0.793	1.925	0.748
DIVE	ag23	1.221	0.755	1.557	0.647
Rhoana	Test1	1.162	1.646	1.179	0.486
DIVE	unet1	1.001	1.436	0.861	0.443
DIVE	unet-1	1.001	1.436	0.861	0.443
DIVE	unet3	0.994	1.451	0.831	0.441
DIVE	unet-3	0.994	1.451	0.831	0.441

CREMI score: The geometric mean of (VOI split + VOI merge) and ARAND.
VOI split and merge: The Variation of Information between a segmentation X and ground truth Y. The split and merge parts correspond to the conditional entropies H(X|Y) and H(Y|X), respectively.
ARAND: The Adapted Rand Error, i.e., 1.0 - Rand F-Score.

For each value, lower is better.

Results for the synaptic cleft detection category, averaged over all samples.

Group	Submission	CREMI score	FP	FN	1 - F-score	ADGT	ADF
DIVE	exp18_be	136.63	8797.3	0.0	0.014	247.19	26.08
CMM	Max Test	74.10	24019.3	44179.7	0.101	64.63	83.56
VCG	FgUPlus8	58.66	65345.7	11887.0	0.101	70.36	46.96
HSS	3DUNet	65.34	43440.3	22443.3	0.106	63.26	67.43
DLST	DLST001	71.19	53908.0	14839.0	0.106	69.02	73.36
DIVE	exp19lst	90.80	25114.7	21554.0	0.107	117.39	64.21
VCG	FgSm0808	57.34	75120.7	9109.7	0.107	72.74	41.94
DIVE	ex19t5	315.97	64192.0	1757.3	0.112	600.79	31.15
HSS	3DUNet04	79.33	29732.0	27514.3	0.113	53.22	105.44
DKFZ-MIC	nnUNet	74.96	49914.0	18981.3	0.117	64.46	85.46
DLST	DLST002	75.46	56645.7	17498.3	0.119	65.93	85.00
JRC	DTU-2	67.56	70761.3	10069.3	0.123	109.67	25.46
DLST	DLST003	91.71	33118.7	35934.7	0.125	58.14	125.27
3DEM	BC_BC	66.71	82113.3	13347.3	0.126	79.96	53.46
DIVE	WeitUNet	78.12	54372.7	24480.3	0.128	71.51	84.73
JRC	DTU-1	72.21	85169.0	13607.3	0.131	106.31	38.11
CMM	UNet50	69.31	65762.0	12634.7	0.139	97.45	41.17
I2I	CSparSep	75.79	71650.0	18918.3	0.140	72.06	79.52
VCG	FgSm0805	54.23	111486.0	4917.0	0.142	84.04	24.43
I2I	CleftB	74.31	65334.0	21669.0	0.142	92.36	56.26
3DEM	ABC_BC	62.21	99221.7	10981.0	0.151	75.79	48.63
HSS	HSZ	90.11	65092.3	25807.3	0.154	99.61	80.61
DIVE	cleft_hi	107.24	44844.3	52063.7	0.158	94.14	120.33
I2I	CleftB1	64.97	80004.7	19895.0	0.158	90.98	38.97
DIVE	BouUNet	81.45	75985.0	21974.0	0.160	76.66	86.24

CREMI score: The mean of ADGT and ADF. We are not including the F-Score for now, as our current way of computing it can lead to unfair comparison. We are working on a more robust measure and will update the results accordingly.
FP, FN, and F-Score: The False Positives, False Negatives, and the resulting F-Score in the clefts detection volume. See metrics for details.
ADGT: The average distance of any found cleft voxel to the closest ground truth cleft voxel.
ADF: The average distance of any ground truth cleft voxel to the closest found cleft voxel.

For each value, lower is better (F-Score shown as 1 - F-Score).

Results for the synaptic partner identification category, averaged over all samples.

Group	Submission	CREMI score	FP	FN
PNI	asyn_mod	0.423	367.667	262.333
PNI	asyn_at0	0.468	293.333	297.000
PNI	asyn_at1	0.490	274.333	314.667
PNI	asyn_ori	0.493	310.000	302.333
NO2	lr_balan	0.447	175.333	314.000
NO2	lr_affin	0.567	118.333	450.000
IAL	PSP_unar	0.461	266.667	281.000
IAL	PSP_full	0.464	187.333	310.000
HCBS	Tr66_80K	0.449	223.000	286.667
HCBS	Tr66comb	0.451	219.000	292.333
HCBS	PrnTrn66	0.465	178.667	322.333
HCBS	Tr66t-01	0.469	182.667	318.667
DIVE	PTR_V2	0.453	162.667	333.667
AnonumoysGroup	PrTrn66	0.620	238.000	451.667

CREMI score: 1 - F-Score of the FP and FN.
FP, FN: The False Positives and False Negatives synaptic partner pairs. See metrics for details.

For each value, lower is better.

MICCAI Challenge on Circuit Reconstruction from Electron Microscopy Images